PDOMAINS is a resource centered around definition and assignment of structural domains in proteins.
pDomain resource is centered around defining structural domains from 3D coordinates. This resource brings together current state-of-the-art algorithmic methods for partitioning proteins into domains. Evaluation of the methods is performed using multiple parameters and the comprehensive benchmark dataset.
Benchmark datasets used in evaluation of the methods are available for download to the developers on new methods of domain assignments and to the broader scientific community.
Currently this resource offers:
If you are interested in benchmarking your domain assignment method, contact us.
This work is sponsored by the National Institutes of Heath (NIH) Grant Number GM63208 (NIH/NIGMS)